Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AGAP10P-201ENST00000454844 2418 ntBASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AC067750.1-201ENST00000608826 6545 ntBASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AL358472.3-201ENST00000608147 415 ntBASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AC023794.5-201ENST00000564380 2157 ntBASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AL354989.2-201ENST00000435838 1540 ntBASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF3BQ9BZI7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
UPF3BQ9BZI7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UPF3BQ9BZI7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UPF3BQ9BZI7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.39■□□□□ 0.38
UPF3BQ9BZI7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UPF3BQ9BZI7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 CNN2P8-201ENST00000421872 913 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 AC016694.1-201ENST00000434179 700 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 AC007551.1-201ENST00000457394 519 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 COX5BP1-201ENST00000507622 393 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 AP005482.1-201ENST00000563722 1273 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 AC006453.4-201ENST00000636949 1252 ntBASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
UPF3BQ9BZI7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms