Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 KRT8P35-201ENST00000483942 1338 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 AC020910.5-201ENST00000623668 1865 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
MUC4Q99102 IGHJ2P-201ENST00000454480 60 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 AL391280.1-201ENST00000506969 1062 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 AC022616.1-201ENST00000518688 554 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
MUC4Q99102 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.68□□□□□ -0.7
MUC4Q99102 APRT-204ENST00000563655 709 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.68□□□□□ -0.7
MUC4Q99102 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 AGAP10P-201ENST00000454844 2418 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
MUC4Q99102 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 MSTO2P-201ENST00000314835 1709 ntBASIC10.68□□□□□ -0.7
MUC4Q99102 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.68□□□□□ -0.7
MUC4Q99102 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
MUC4Q99102 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 CLUHP6-201ENST00000580789 941 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 AC244093.1-201ENST00000610837 814 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
MUC4Q99102 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 AC009093.2-202ENST00000620513 2079 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms