Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.75□□□□□ -0.21
NR1H4Q96RI1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR1H4Q96RI1 FOXO1B-201ENST00000504678 1527 ntBASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC034105.1-201ENST00000563488 319 ntBASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC092364.2-202ENST00000597012 1073 ntBASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC009955.4-201ENST00000597192 544 ntBASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.74□□□□□ -0.21
NR1H4Q96RI1 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AC022400.8-201ENST00000623453 3599 ntBASIC13.73□□□□□ -0.21
NR1H4Q96RI1 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms