Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC073957.3-201ENST00000609998 6758 ntBASIC12.77□□□□□ -0.37
CPNE2Q96FN4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC011474.4-201ENST00000623523 2076 ntBASIC12.76□□□□□ -0.37
CPNE2Q96FN4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC092552.1-201ENST00000547243 906 ntBASIC12.76□□□□□ -0.37
CPNE2Q96FN4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AP001063.1-201ENST00000568332 529 ntBASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 KRT8P35-201ENST00000483942 1338 ntBASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 MST1P2-201ENST00000457982 2291 ntBASIC12.76□□□□□ -0.37
CPNE2Q96FN4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.76□□□□□ -0.37
CPNE2Q96FN4 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC215219.1-201ENST00000400706 1817 ntBASIC12.75□□□□□ -0.37
CPNE2Q96FN4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC131206.1-201ENST00000538078 1211 ntBASIC12.75□□□□□ -0.37
CPNE2Q96FN4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CPNE2Q96FN4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms