Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 E2F3P2-201ENST00000447755 1422 ntBASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AC005034.1-201ENST00000426657 489 ntBASIC13.64□□□□□ -0.23
NUP43Q8NFH3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AL161932.2-201ENST00000435436 679 ntBASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.64□□□□□ -0.23
NUP43Q8NFH3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP43Q8NFH3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 KRT8P24-201ENST00000560290 1559 ntBASIC13.63□□□□□ -0.23
NUP43Q8NFH3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 BEND3P1-201ENST00000421591 1944 ntBASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AC079776.1-201ENST00000401540 1152 ntBASIC13.63□□□□□ -0.23
NUP43Q8NFH3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 U91328.1-201ENST00000437528 223 ntBASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 DUX4L46-201ENST00000566845 751 ntBASIC13.63□□□□□ -0.23
NUP43Q8NFH3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NUP43Q8NFH3 AL035252.4-201ENST00000624174 288 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms