Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC004945.1-201ENST00000416738 983 ntBASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC026434.2-201ENST00000506094 1078 ntBASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC009118.2-201ENST00000613275 655 ntBASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC106028.4-201ENST00000614509 607 ntBASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AL391825.1-201ENST00000457671 1364 ntBASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 AL365181.3-201ENST00000605886 3222 ntBASIC12.9□□□□□ -0.34
DNAAF1Q8NEP3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
DNAAF1Q8NEP3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SALL4P5-201ENST00000419001 1760 ntBASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SOCS2P1-201ENST00000417727 557 ntBASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 TLE1P1-201ENST00000422965 589 ntBASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 DFFBP1-201ENST00000433250 979 ntBASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.89□□□□□ -0.35
DNAAF1Q8NEP3 AC215219.1-201ENST00000400706 1817 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms