Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MBLAC2-202ENST00000514906 1936 ntBASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 SHC1P1-201ENST00000425230 1745 ntBASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 AC092053.3-201ENST00000641308 4975 ntBASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 MIR326-201ENST00000362220 95 ntBASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 MIR3197-201ENST00000582241 73 ntBASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKL3Q8IVW4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 USP17L6P-201ENST00000382470 1197 ntBASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 NME2P1-201ENST00000426182 414 ntBASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 AP000812.2-201ENST00000538934 718 ntBASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 AL031595.1-201ENST00000623969 4709 ntBASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKL3Q8IVW4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDKL3Q8IVW4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms