Protein–RNA interactions for Protein: Q6UWN0

LYPD4, Ly6/PLAUR domain-containing protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD4Q6UWN0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 AL391825.1-201ENST00000457671 1364 ntBASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LYPD4Q6UWN0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LYPD4Q6UWN0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
LYPD4Q6UWN0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AC009093.2-202ENST00000620513 2079 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AC015909.5-201ENST00000624336 2266 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AC236430.1-201ENST00000402231 743 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AC087499.6-201ENST00000411576 835 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AC022137.2-201ENST00000503482 481 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 KRT18P25-201ENST00000508931 1278 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 GCOM2-201ENST00000509133 1104 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 RPSAP52-203ENST00000622976 1023 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AL603764.1-201ENST00000636452 321 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AL591122.2-201ENST00000624125 1853 ntBASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYPD4Q6UWN0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYPD4Q6UWN0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms