Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 AL627231.1-201ENST00000394467 1125 ntBASIC15.44■□□□□ 0.06
VARS2Q5ST30 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 MIR3677-201ENST00000578964 60 ntBASIC15.44■□□□□ 0.06
VARS2Q5ST30 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 RN7SL555P-201ENST00000584742 339 ntBASIC15.44■□□□□ 0.06
VARS2Q5ST30 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 TSPY26P-202ENST00000565928 3884 ntBASIC15.44■□□□□ 0.06
VARS2Q5ST30 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 FGFR3P1-201ENST00000449999 601 ntBASIC15.43■□□□□ 0.06
VARS2Q5ST30 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AP001981.1-201ENST00000531132 738 ntBASIC15.43■□□□□ 0.06
VARS2Q5ST30 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AC103691.2-201ENST00000618824 433 ntBASIC15.43■□□□□ 0.06
VARS2Q5ST30 AC009039.2-201ENST00000624524 529 ntBASIC15.43■□□□□ 0.06
VARS2Q5ST30 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VARS2Q5ST30 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VARS2Q5ST30 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VARS2Q5ST30 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 AC026316.1-201ENST00000398900 414 ntBASIC15.42■□□□□ 0.06
VARS2Q5ST30 BANF1P3-201ENST00000412556 261 ntBASIC15.42■□□□□ 0.06
VARS2Q5ST30 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.42■□□□□ 0.06
VARS2Q5ST30 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms