Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B3Q16720 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2B3Q16720 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ATP2B3Q16720 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 FRMPD2B-201ENST00000431305 1347 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 LINC00552-201ENST00000625151 2579 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 AC113367.3-201ENST00000508316 1912 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 POU5F1P2-201ENST00000521750 823 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 AC005586.2-201ENST00000563946 837 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 MIR4754-201ENST00000582477 89 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 AL133499.1-201ENST00000596207 608 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 INTS4P1-203ENST00000641008 3683 ntBASIC17.79■□□□□ 0.44
ATP2B3Q16720 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2B3Q16720 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2B3Q16720 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 TPT1P11-201ENST00000458482 498 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 AC242376.1-201ENST00000559033 726 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 AC015967.2-201ENST00000624092 234 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 AC006435.4-201ENST00000625037 234 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 AL356737.1-201ENST00000634391 234 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 AC015909.3-201ENST00000572855 1794 ntBASIC17.78■□□□□ 0.44
ATP2B3Q16720 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2B3Q16720 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2B3Q16720 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ATP2B3Q16720 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP2B3Q16720 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2B3Q16720 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2B3Q16720 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2B3Q16720 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP2B3Q16720 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2B3Q16720 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2B3Q16720 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms