Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 OR2I1P-209ENST00000641730 5365 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC092978.1-202ENST00000637590 1327 ntBASIC12.62□□□□□ -0.39
FAM27E3Q08E93 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC215219.1-201ENST00000400706 1817 ntBASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC097376.2-205ENST00000610159 5334 ntBASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 SORD2P-201ENST00000558556 1069 ntBASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC140658.4-201ENST00000561990 352 ntBASIC12.62□□□□□ -0.39
FAM27E3Q08E93 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC242376.2-201ENST00000619355 883 ntBASIC12.62□□□□□ -0.39
FAM27E3Q08E93 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM27E3Q08E93 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 AGGF1P1-201ENST00000509500 2073 ntBASIC12.61□□□□□ -0.39
FAM27E3Q08E93 AC015656.1-201ENST00000624209 3578 ntBASIC12.61□□□□□ -0.39
FAM27E3Q08E93 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM27E3Q08E93 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms