Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.38□□□□□ -0.27
PUDPQ08623 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.38□□□□□ -0.27
PUDPQ08623 CU639417.3-201ENST00000624240 1404 ntBASIC13.38□□□□□ -0.27
PUDPQ08623 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PUDPQ08623 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PUDPQ08623 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 AL359881.3-201ENST00000602640 1721 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 TPM3P8-201ENST00000330554 643 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.37□□□□□ -0.27
PUDPQ08623 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.37□□□□□ -0.27
PUDPQ08623 C2orf27AP3-201ENST00000434123 579 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 TTTY23B-201ENST00000442790 549 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.37□□□□□ -0.27
PUDPQ08623 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.37□□□□□ -0.27
PUDPQ08623 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 AP005018.1-201ENST00000525475 301 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 AC138696.2-201ENST00000607376 223 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 AL022328.1-201ENST00000610050 478 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 AL354718.3-201ENST00000616414 581 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 AC138466.3-201ENST00000619983 221 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 CR382287.1-201ENST00000623954 586 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 AC015802.1-201ENST00000588104 1449 ntBASIC13.37□□□□□ -0.27
PUDPQ08623 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PUDPQ08623 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.37□□□□□ -0.27
PUDPQ08623 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PUDPQ08623 Z82170.1-201ENST00000625081 3192 ntBASIC13.36□□□□□ -0.27
PUDPQ08623 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PUDPQ08623 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.36□□□□□ -0.27
PUDPQ08623 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PUDPQ08623 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 AC005562.1-201ENST00000583030 3219 ntBASIC13.36□□□□□ -0.27
PUDPQ08623 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.36□□□□□ -0.27
PUDPQ08623 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 AC011840.2-201ENST00000563063 1520 ntBASIC13.36□□□□□ -0.27
PUDPQ08623 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PUDPQ08623 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
PUDPQ08623 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms