Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 TMBIM7P-202ENST00000641474 1516 ntBASIC14.06□□□□□ -0.16
PCDH1Q08174 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AC100850.1-201ENST00000506768 649 ntBASIC14.06□□□□□ -0.16
PCDH1Q08174 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDH1Q08174 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDH1Q08174 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDH1Q08174 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 AC126335.2-201ENST00000623362 4637 ntBASIC14.05□□□□□ -0.16
PCDH1Q08174 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCDH1Q08174 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDH1Q08174 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
PCDH1Q08174 AC079178.1-201ENST00000420915 656 ntBASIC14.05□□□□□ -0.16
PCDH1Q08174 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDH1Q08174 ST13P19-201ENST00000442505 1124 ntBASIC14.05□□□□□ -0.16
PCDH1Q08174 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 CTBP2P5-201ENST00000454986 1264 ntBASIC14.05□□□□□ -0.16
PCDH1Q08174 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDH1Q08174 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PCDH1Q08174 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDH1Q08174 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 AC244157.2-201ENST00000616239 1006 ntBASIC14.05□□□□□ -0.16
PCDH1Q08174 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDH1Q08174 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PCDH1Q08174 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDH1Q08174 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDH1Q08174 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDH1Q08174 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDH1Q08174 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDH1Q08174 AL023775.1-201ENST00000454907 1746 ntBASIC14.04□□□□□ -0.16
PCDH1Q08174 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDH1Q08174 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDH1Q08174 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDH1Q08174 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDH1Q08174 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms