Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PMS2P2-201ENST00000425039 1128 ntBASIC13.47□□□□□ -0.25
PRKCDQ05655 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.47□□□□□ -0.25
PRKCDQ05655 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 AL162726.2-201ENST00000438986 1017 ntBASIC13.47□□□□□ -0.25
PRKCDQ05655 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 AC093433.1-201ENST00000458048 571 ntBASIC13.47□□□□□ -0.25
PRKCDQ05655 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.47□□□□□ -0.25
PRKCDQ05655 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 AC103988.2-201ENST00000561804 725 ntBASIC13.47□□□□□ -0.25
PRKCDQ05655 AC004233.3-201ENST00000607794 1269 ntBASIC13.47□□□□□ -0.25
PRKCDQ05655 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.47□□□□□ -0.25
PRKCDQ05655 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.47□□□□□ -0.25
PRKCDQ05655 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
PRKCDQ05655 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 FAM90A12P-201ENST00000519497 2375 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 FAM90A24P-201ENST00000520792 2369 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PRKCDQ05655 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PRKCDQ05655 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 CYMP-203ENST00000474680 1263 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 MESTP3-201ENST00000503460 968 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 AC138696.2-201ENST00000607376 223 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 CU634019.7-201ENST00000624153 1185 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 FP236241.2-201ENST00000624906 1185 ntBASIC13.46□□□□□ -0.25
PRKCDQ05655 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PRKCDQ05655 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
PRKCDQ05655 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms