Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC078819.1-201ENST00000547454 765 ntBASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC012085.1-201ENST00000548270 765 ntBASIC14.07□□□□□ -0.16
HMGCS1Q01581 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC015936.2-201ENST00000593177 259 ntBASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 IGHV3-72-202ENST00000621503 303 ntBASIC14.07□□□□□ -0.16
HMGCS1Q01581 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC131212.3-201ENST00000624087 4219 ntBASIC14.07□□□□□ -0.16
HMGCS1Q01581 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 ARSEP1-201ENST00000420443 635 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 AC005034.1-201ENST00000426657 489 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 TTTY23B-201ENST00000442790 549 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 AC233724.13-201ENST00000598383 410 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 AC138951.2-201ENST00000623455 1161 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 AL035252.4-201ENST00000624174 288 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 LINC02486-201ENST00000604157 3000 ntBASIC14.06□□□□□ -0.16
HMGCS1Q01581 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HMGCS1Q01581 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGCS1Q01581 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AL354989.2-201ENST00000435838 1540 ntBASIC14.05□□□□□ -0.16
HMGCS1Q01581 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms