Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP4BP1P59074 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AL928921.2-201ENST00000641325 2442 ntBASIC16.71■□□□□ 0.27
CHMP4BP1P59074 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 RN7SKP175-201ENST00000408472 289 ntBASIC16.71■□□□□ 0.27
CHMP4BP1P59074 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 NUP210P1-202ENST00000504322 710 ntBASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP4BP1P59074 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP4BP1P59074 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP4BP1P59074 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP4BP1P59074 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.7■□□□□ 0.26
CHMP4BP1P59074 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 BNIP3P13-201ENST00000599968 566 ntBASIC16.7■□□□□ 0.26
CHMP4BP1P59074 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 AL805961.1-203ENST00000641078 1258 ntBASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 AP000593.2-201ENST00000542775 1433 ntBASIC16.7■□□□□ 0.26
CHMP4BP1P59074 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP4BP1P59074 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AC012508.2-201ENST00000567613 1472 ntBASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms