Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 AC008132.1-202ENST00000342005 1389 ntBASIC14.82□□□□□ -0.04
CDH4P55283 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH4P55283 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH4P55283 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH4P55283 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 AP002353.1-201ENST00000528257 1599 ntBASIC14.81□□□□□ -0.04
CDH4P55283 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDH4P55283 ISCA2P1-201ENST00000425548 448 ntBASIC14.81□□□□□ -0.04
CDH4P55283 AC092580.1-201ENST00000433998 658 ntBASIC14.81□□□□□ -0.04
CDH4P55283 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH4P55283 AC006335.1-201ENST00000445200 547 ntBASIC14.81□□□□□ -0.04
CDH4P55283 AC024681.1-201ENST00000521917 487 ntBASIC14.81□□□□□ -0.04
CDH4P55283 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDH4P55283 MIR3619-201ENST00000579667 83 ntBASIC14.81□□□□□ -0.04
CDH4P55283 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH4P55283 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CDH4P55283 LINC01165-201ENST00000445190 1623 ntBASIC14.81□□□□□ -0.04
CDH4P55283 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH4P55283 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.8□□□□□ -0.04
CDH4P55283 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 C8orf49-201ENST00000525043 1968 ntBASIC14.8□□□□□ -0.04
CDH4P55283 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms