Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HADHBP55084 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HADHBP55084 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.16■□□□□ 0.02
HADHBP55084 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.16■□□□□ 0.02
HADHBP55084 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.16■□□□□ 0.02
HADHBP55084 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HADHBP55084 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HADHBP55084 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HADHBP55084 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HADHBP55084 CCT8L1P-201ENST00000465400 1674 ntBASIC15.16■□□□□ 0.02
HADHBP55084 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HADHBP55084 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HADHBP55084 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HADHBP55084 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 AC114271.1-201ENST00000612689 2813 ntBASIC15.15■□□□□ 0.02
HADHBP55084 ABCD1P2-201ENST00000429313 1601 ntBASIC15.15■□□□□ 0.02
HADHBP55084 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HADHBP55084 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.15■□□□□ 0.02
HADHBP55084 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.15■□□□□ 0.02
HADHBP55084 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 AC022217.1-201ENST00000521069 738 ntBASIC15.15■□□□□ 0.02
HADHBP55084 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 RBM8B-201ENST00000555532 525 ntBASIC15.15■□□□□ 0.02
HADHBP55084 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.15■□□□□ 0.02
HADHBP55084 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 RHOXF1P1-202ENST00000635473 501 ntBASIC15.15■□□□□ 0.02
HADHBP55084 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 AC244394.1-201ENST00000435000 1665 ntBASIC15.15■□□□□ 0.02
HADHBP55084 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.15■□□□□ 0.02
HADHBP55084 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HADHBP55084 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HADHBP55084 PKD1P5-201ENST00000532415 10291 ntBASIC15.14■□□□□ 0.02
HADHBP55084 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HADHBP55084 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.14■□□□□ 0.01
HADHBP55084 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HADHBP55084 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HADHBP55084 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HADHBP55084 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.14■□□□□ 0.01
HADHBP55084 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.14■□□□□ 0.01
HADHBP55084 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HADHBP55084 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HADHBP55084 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HADHBP55084 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HADHBP55084 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HADHBP55084 AC103592.1-201ENST00000394513 664 ntBASIC15.14■□□□□ 0.01
HADHBP55084 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HADHBP55084 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms