Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.71□□□□□ -0.05
LIMK2P53671 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.71□□□□□ -0.05
LIMK2P53671 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.71□□□□□ -0.05
LIMK2P53671 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.71□□□□□ -0.05
LIMK2P53671 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIMK2P53671 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.71□□□□□ -0.05
LIMK2P53671 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIMK2P53671 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.71□□□□□ -0.06
LIMK2P53671 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIMK2P53671 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.71□□□□□ -0.06
LIMK2P53671 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.71□□□□□ -0.06
LIMK2P53671 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LIMK2P53671 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
LIMK2P53671 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIMK2P53671 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIMK2P53671 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LIMK2P53671 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 AC090643.2-201ENST00000623442 2029 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 HOMER2P2-201ENST00000451621 847 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.7□□□□□ -0.06
LIMK2P53671 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 MIR4741-201ENST00000579822 90 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 ECM1P1-201ENST00000604092 1279 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 AL606495.2-201ENST00000605867 535 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 AL118558.3-201ENST00000607414 1079 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.7□□□□□ -0.06
LIMK2P53671 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.7□□□□□ -0.06
LIMK2P53671 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LIMK2P53671 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.7□□□□□ -0.06
LIMK2P53671 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIMK2P53671 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LIMK2P53671 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
LIMK2P53671 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LIMK2P53671 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms