Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 HLA-W-207ENST00000439514 771 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 OR52X1P-201ENST00000446117 914 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 HNRNPA1P73-201ENST00000446472 928 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC16.18■□□□□ 0.18
VEGFBP49765 RPL10P8-201ENST00000522888 313 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC16.18■□□□□ 0.18
VEGFBP49765 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 MIR8071-1-201ENST00000616769 65 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 MIR8071-2-201ENST00000616772 65 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.18■□□□□ 0.18
VEGFBP49765 DUX4L33-201ENST00000635217 958 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
VEGFBP49765 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
VEGFBP49765 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VEGFBP49765 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 AC092850.2-201ENST00000623821 2697 ntBASIC16.18■□□□□ 0.18
VEGFBP49765 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC16.18■□□□□ 0.18
VEGFBP49765 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
VEGFBP49765 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.18■□□□□ 0.18
VEGFBP49765 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VEGFBP49765 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.17■□□□□ 0.18
VEGFBP49765 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 AC011270.2-201ENST00000624293 2550 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 MIR766-201ENST00000390223 111 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 AC005722.1-201ENST00000431878 964 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 AC139143.1-201ENST00000441772 1207 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 RBM14-205ENST00000443702 732 ntTSL 3 BASIC16.17■□□□□ 0.18
VEGFBP49765 AC104212.2-201ENST00000478813 628 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 SRPK2P-201ENST00000523408 1100 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC16.17■□□□□ 0.18
VEGFBP49765 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.17■□□□□ 0.18
VEGFBP49765 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 FAM223B-202ENST00000598177 713 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 FAM223A-202ENST00000625204 713 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 AC245369.8-201ENST00000636589 306 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 Z98885.3-201ENST00000624882 1757 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 AC124944.3-201ENST00000607976 1304 ntBASIC16.17■□□□□ 0.18
VEGFBP49765 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VEGFBP49765 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.17■□□□□ 0.18
VEGFBP49765 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.17■□□□□ 0.18
VEGFBP49765 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VEGFBP49765 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VEGFBP49765 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 SFPQP1-201ENST00000446621 1786 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VEGFBP49765 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VEGFBP49765 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VEGFBP49765 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VEGFBP49765 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 HSD3BP1-201ENST00000286193 1111 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC16.16■□□□□ 0.18
VEGFBP49765 AC131235.2-201ENST00000445553 1057 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC16.16■□□□□ 0.18
VEGFBP49765 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC16.16■□□□□ 0.18
VEGFBP49765 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC16.16■□□□□ 0.18
VEGFBP49765 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC16.16■□□□□ 0.18
VEGFBP49765 FAM213AP2-201ENST00000521579 683 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 OR4A49P-201ENST00000527050 632 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms