Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 HSPA8P5-201ENST00000456928 2069 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APOBEC1P41238 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.16□□□□□ -0.3
APOBEC1P41238 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
APOBEC1P41238 KLF2P1-201ENST00000447438 1042 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.16□□□□□ -0.3
APOBEC1P41238 FAM8A2P-201ENST00000528813 1142 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.16□□□□□ -0.3
APOBEC1P41238 AC005324.6-201ENST00000587972 613 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 AC021016.3-201ENST00000608367 477 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 AP000346.4-201ENST00000614827 381 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 AL096828.3-201ENST00000615354 462 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
APOBEC1P41238 REXO1L6P-201ENST00000603433 1515 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.16□□□□□ -0.3
APOBEC1P41238 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 AC016397.2-201ENST00000624848 1985 ntBASIC13.16□□□□□ -0.3
APOBEC1P41238 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOBEC1P41238 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
APOBEC1P41238 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.16□□□□□ -0.3
APOBEC1P41238 AC138969.2-201ENST00000532739 9932 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 AC144522.1-201ENST00000625111 1658 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
APOBEC1P41238 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOBEC1P41238 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.15□□□□□ -0.3
APOBEC1P41238 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.15□□□□□ -0.3
APOBEC1P41238 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOBEC1P41238 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.15□□□□□ -0.3
APOBEC1P41238 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.15□□□□□ -0.3
APOBEC1P41238 AL160314.3-201ENST00000556041 767 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.15□□□□□ -0.3
APOBEC1P41238 AC005962.1-201ENST00000584100 773 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 AL008721.1-201ENST00000609964 604 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 MIR6752-201ENST00000618442 71 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 AC133540.1-201ENST00000620845 1019 ntBASIC13.15□□□□□ -0.3
APOBEC1P41238 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.15□□□□□ -0.3
APOBEC1P41238 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.15□□□□□ -0.3
APOBEC1P41238 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
APOBEC1P41238 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.15□□□□□ -0.3
APOBEC1P41238 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBEC1P41238 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms