Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.01□□□□□ -0.33
HOXC12P31275 AC021723.1-201ENST00000486306 515 ntBASIC13.01□□□□□ -0.33
HOXC12P31275 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.01□□□□□ -0.33
HOXC12P31275 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.01□□□□□ -0.33
HOXC12P31275 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.01□□□□□ -0.33
HOXC12P31275 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.01□□□□□ -0.33
HOXC12P31275 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.01□□□□□ -0.33
HOXC12P31275 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
HOXC12P31275 AP001505.2-201ENST00000616815 443 ntBASIC13.01□□□□□ -0.33
HOXC12P31275 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.01□□□□□ -0.33
HOXC12P31275 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 AC006058.4-201ENST00000624016 1670 ntBASIC13.01□□□□□ -0.33
HOXC12P31275 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 LINC01101-201ENST00000622953 1884 ntBASIC13.01□□□□□ -0.33
HOXC12P31275 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 PTPRVP-205ENST00000641549 5067 ntBASIC13□□□□□ -0.33
HOXC12P31275 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 AL008707.1-201ENST00000422498 534 ntBASIC13□□□□□ -0.33
HOXC12P31275 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13□□□□□ -0.33
HOXC12P31275 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 FTLP1-201ENST00000449155 526 ntBASIC13□□□□□ -0.33
HOXC12P31275 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 MIR4683-201ENST00000579659 81 ntBASIC13□□□□□ -0.33
HOXC12P31275 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13□□□□□ -0.33
HOXC12P31275 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
HOXC12P31275 AP001002.3-201ENST00000623482 206 ntBASIC13□□□□□ -0.33
HOXC12P31275 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13□□□□□ -0.33
HOXC12P31275 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HOXC12P31275 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HOXC12P31275 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HOXC12P31275 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.99□□□□□ -0.33
HOXC12P31275 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HOXC12P31275 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.99□□□□□ -0.33
HOXC12P31275 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.99□□□□□ -0.33
HOXC12P31275 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HOXC12P31275 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms