Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 AGGF1P10-201ENST00000635005 2191 ntBASIC13.73□□□□□ -0.21
PEX2P28328 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.73□□□□□ -0.21
PEX2P28328 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
PEX2P28328 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PEX2P28328 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PEX2P28328 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.73□□□□□ -0.21
PEX2P28328 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEX2P28328 AC022497.1-201ENST00000624916 3691 ntBASIC13.72□□□□□ -0.21
PEX2P28328 TRIM80P-201ENST00000455685 2848 ntBASIC13.72□□□□□ -0.21
PEX2P28328 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PEX2P28328 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 AC104758.3-203ENST00000562938 2123 ntBASIC13.72□□□□□ -0.21
PEX2P28328 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PEX2P28328 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.72□□□□□ -0.21
PEX2P28328 YBX2P1-201ENST00000394192 760 ntBASIC13.72□□□□□ -0.21
PEX2P28328 MIR940-201ENST00000401276 94 ntBASIC13.72□□□□□ -0.21
PEX2P28328 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.72□□□□□ -0.21
PEX2P28328 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.72□□□□□ -0.21
PEX2P28328 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.72□□□□□ -0.21
PEX2P28328 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 GAPDHP40-201ENST00000505218 1006 ntBASIC13.72□□□□□ -0.21
PEX2P28328 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
PEX2P28328 KRT18P58-201ENST00000527480 1120 ntBASIC13.72□□□□□ -0.21
PEX2P28328 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.72□□□□□ -0.21
PEX2P28328 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 SORD2P-201ENST00000558556 1069 ntBASIC13.72□□□□□ -0.21
PEX2P28328 KRT18P8-201ENST00000581937 1246 ntBASIC13.72□□□□□ -0.21
PEX2P28328 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.72□□□□□ -0.21
PEX2P28328 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.72□□□□□ -0.21
PEX2P28328 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.72□□□□□ -0.21
PEX2P28328 AC018529.1-201ENST00000613063 361 ntBASIC13.72□□□□□ -0.21
PEX2P28328 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.72□□□□□ -0.21
PEX2P28328 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.72□□□□□ -0.21
PEX2P28328 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PEX2P28328 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEX2P28328 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 AC012531.1-201ENST00000562848 2680 ntBASIC13.71□□□□□ -0.21
PEX2P28328 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.71□□□□□ -0.21
PEX2P28328 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.71□□□□□ -0.21
PEX2P28328 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.71□□□□□ -0.21
PEX2P28328 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.71□□□□□ -0.21
PEX2P28328 AL022342.1-201ENST00000400363 863 ntBASIC13.71□□□□□ -0.21
PEX2P28328 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 MTND6P24-201ENST00000440466 518 ntBASIC13.71□□□□□ -0.21
PEX2P28328 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.71□□□□□ -0.21
PEX2P28328 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.71□□□□□ -0.21
PEX2P28328 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PEX2P28328 AC040169.1-201ENST00000565382 521 ntBASIC13.71□□□□□ -0.21
PEX2P28328 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.71□□□□□ -0.21
PEX2P28328 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PEX2P28328 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.71□□□□□ -0.21
PEX2P28328 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PEX2P28328 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms