Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COL8A2P25067 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.31□□□□□ -0.44
COL8A2P25067 INTS4P1-203ENST00000641008 3683 ntBASIC12.31□□□□□ -0.44
COL8A2P25067 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COL8A2P25067 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.3□□□□□ -0.44
COL8A2P25067 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 AC009093.10-201ENST00000641956 1442 ntBASIC12.3□□□□□ -0.44
COL8A2P25067 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 AC010327.5-201ENST00000586923 3061 ntBASIC12.3□□□□□ -0.44
COL8A2P25067 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.3□□□□□ -0.44
COL8A2P25067 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 AC078875.1-201ENST00000431907 724 ntBASIC12.3□□□□□ -0.44
COL8A2P25067 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.3□□□□□ -0.44
COL8A2P25067 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 RN7SL720P-201ENST00000488178 304 ntBASIC12.3□□□□□ -0.44
COL8A2P25067 AC090857.1-201ENST00000527400 390 ntBASIC12.3□□□□□ -0.44
COL8A2P25067 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.3□□□□□ -0.44
COL8A2P25067 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.3□□□□□ -0.44
COL8A2P25067 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.3□□□□□ -0.44
COL8A2P25067 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.3□□□□□ -0.44
COL8A2P25067 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 AC092299.1-201ENST00000632679 757 ntBASIC12.3□□□□□ -0.44
COL8A2P25067 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.3□□□□□ -0.44
COL8A2P25067 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.3□□□□□ -0.44
COL8A2P25067 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COL8A2P25067 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 KRT8P21-201ENST00000430398 1491 ntBASIC12.29□□□□□ -0.44
COL8A2P25067 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
COL8A2P25067 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.29□□□□□ -0.44
COL8A2P25067 KHSRPP1-201ENST00000427983 1768 ntBASIC12.29□□□□□ -0.44
COL8A2P25067 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.29□□□□□ -0.44
COL8A2P25067 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.29□□□□□ -0.44
COL8A2P25067 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
COL8A2P25067 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.29□□□□□ -0.44
COL8A2P25067 ISCA2P1-201ENST00000425548 448 ntBASIC12.29□□□□□ -0.44
COL8A2P25067 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.29□□□□□ -0.44
COL8A2P25067 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms