Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CAPN3P20807 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPN3P20807 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CAPN3P20807 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPN3P20807 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPN3P20807 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPN3P20807 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPN3P20807 AC123567.1-201ENST00000548294 1261 ntBASIC14.08□□□□□ -0.16
CAPN3P20807 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.08□□□□□ -0.16
CAPN3P20807 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPN3P20807 AC093726.1-201ENST00000608064 963 ntBASIC14.08□□□□□ -0.16
CAPN3P20807 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPN3P20807 AP001002.3-201ENST00000623482 206 ntBASIC14.08□□□□□ -0.16
CAPN3P20807 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CAPN3P20807 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.08□□□□□ -0.16
CAPN3P20807 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.08□□□□□ -0.16
CAPN3P20807 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 AC139712.1-201ENST00000378256 1875 ntBASIC14.08□□□□□ -0.16
CAPN3P20807 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CAPN3P20807 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CAPN3P20807 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CAPN3P20807 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 LRRC59-203ENST00000576448 1531 ntBASIC14.07□□□□□ -0.16
CAPN3P20807 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CAPN3P20807 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 FO681548.1-201ENST00000455617 1132 ntBASIC14.07□□□□□ -0.16
CAPN3P20807 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 SORD2P-201ENST00000558556 1069 ntBASIC14.07□□□□□ -0.16
CAPN3P20807 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.07□□□□□ -0.16
CAPN3P20807 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CAPN3P20807 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CAPN3P20807 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.07□□□□□ -0.16
CAPN3P20807 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CAPN3P20807 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms