Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 CD8B2-202ENST00000417670 633 ntBASIC12.41□□□□□ -0.42
BCL3P20749 ARSEP1-201ENST00000420443 635 ntBASIC12.41□□□□□ -0.42
BCL3P20749 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.41□□□□□ -0.42
BCL3P20749 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.41□□□□□ -0.42
BCL3P20749 COX5BP1-201ENST00000507622 393 ntBASIC12.41□□□□□ -0.42
BCL3P20749 KRT90P-201ENST00000549264 1064 ntBASIC12.41□□□□□ -0.42
BCL3P20749 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
BCL3P20749 AC027237.1-201ENST00000560942 655 ntBASIC12.41□□□□□ -0.42
BCL3P20749 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.41□□□□□ -0.42
BCL3P20749 RN7SL713P-201ENST00000582127 302 ntBASIC12.41□□□□□ -0.42
BCL3P20749 AC073413.1-201ENST00000603927 732 ntBASIC12.41□□□□□ -0.42
BCL3P20749 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.41□□□□□ -0.42
BCL3P20749 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.41□□□□□ -0.42
BCL3P20749 IGHV3-72-202ENST00000621503 303 ntBASIC12.41□□□□□ -0.42
BCL3P20749 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.41□□□□□ -0.42
BCL3P20749 AC006453.4-201ENST00000636949 1252 ntBASIC12.41□□□□□ -0.42
BCL3P20749 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.41□□□□□ -0.42
BCL3P20749 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
BCL3P20749 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
BCL3P20749 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BCL3P20749 MBLAC2-202ENST00000514906 1936 ntBASIC12.41□□□□□ -0.42
BCL3P20749 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.41□□□□□ -0.42
BCL3P20749 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 AC089987.1-201ENST00000551654 2209 ntBASIC12.4□□□□□ -0.42
BCL3P20749 PTENP1-202ENST00000532280 3996 ntBASIC12.4□□□□□ -0.42
BCL3P20749 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.4□□□□□ -0.42
BCL3P20749 CICP12-201ENST00000455801 843 ntBASIC12.4□□□□□ -0.42
BCL3P20749 AC007551.1-201ENST00000457394 519 ntBASIC12.4□□□□□ -0.42
BCL3P20749 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.4□□□□□ -0.42
BCL3P20749 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
BCL3P20749 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.4□□□□□ -0.42
BCL3P20749 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.4□□□□□ -0.42
BCL3P20749 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
BCL3P20749 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.4□□□□□ -0.42
BCL3P20749 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.4□□□□□ -0.42
BCL3P20749 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.4□□□□□ -0.42
BCL3P20749 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
BCL3P20749 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.4□□□□□ -0.42
BCL3P20749 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BCL3P20749 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms