Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.82□□□□□ -0.36
RAB3BP20337 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB3BP20337 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB3BP20337 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.82□□□□□ -0.36
RAB3BP20337 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB3BP20337 MEIS3P1-201ENST00000495167 958 ntBASIC12.82□□□□□ -0.36
RAB3BP20337 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.82□□□□□ -0.36
RAB3BP20337 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB3BP20337 PGAM5P1-201ENST00000518923 814 ntBASIC12.82□□□□□ -0.36
RAB3BP20337 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB3BP20337 AL512356.2-201ENST00000546955 174 ntBASIC12.82□□□□□ -0.36
RAB3BP20337 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB3BP20337 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB3BP20337 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB3BP20337 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 AL445209.1-201ENST00000607269 3491 ntBASIC12.81□□□□□ -0.36
RAB3BP20337 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB3BP20337 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RAB3BP20337 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB3BP20337 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB3BP20337 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 MIR4469-201ENST00000583919 79 ntBASIC12.81□□□□□ -0.36
RAB3BP20337 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB3BP20337 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 AC093813.1-201ENST00000605066 256 ntBASIC12.81□□□□□ -0.36
RAB3BP20337 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB3BP20337 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB3BP20337 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB3BP20337 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB3BP20337 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms