Protein–RNA interactions for Protein: P17482

HOXB9, Homeobox protein Hox-B9, humanhuman

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9P17482 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HOXB9P17482 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXB9P17482 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXB9P17482 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HOXB9P17482 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
HOXB9P17482 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HOXB9P17482 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HOXB9P17482 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXB9P17482 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXB9P17482 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXB9P17482 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 NUTM2HP-201ENST00000442076 2498 ntBASIC13.65□□□□□ -0.22
HOXB9P17482 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXB9P17482 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HOXB9P17482 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HOXB9P17482 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HOXB9P17482 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.65□□□□□ -0.22
HOXB9P17482 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXB9P17482 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 RNA5SP486-201ENST00000515961 83 ntBASIC13.65□□□□□ -0.22
HOXB9P17482 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.65□□□□□ -0.22
HOXB9P17482 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HOXB9P17482 KRT18P8-201ENST00000581937 1246 ntBASIC13.65□□□□□ -0.22
HOXB9P17482 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
HOXB9P17482 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXB9P17482 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HOXB9P17482 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.65□□□□□ -0.23
HOXB9P17482 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.64□□□□□ -0.23
HOXB9P17482 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.64□□□□□ -0.23
HOXB9P17482 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HOXB9P17482 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXB9P17482 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 AC005229.1-201ENST00000392885 409 ntBASIC13.64□□□□□ -0.23
HOXB9P17482 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 FAM8A4P-201ENST00000435433 1213 ntBASIC13.64□□□□□ -0.23
HOXB9P17482 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 AL035414.1-201ENST00000451327 857 ntBASIC13.64□□□□□ -0.23
HOXB9P17482 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.64□□□□□ -0.23
HOXB9P17482 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HOXB9P17482 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.64□□□□□ -0.23
HOXB9P17482 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HOXB9P17482 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.64□□□□□ -0.23
HOXB9P17482 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms