Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.51■□□□□ 0.07
FAM228BP0C875 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.51■□□□□ 0.07
FAM228BP0C875 C2orf27AP3-201ENST00000434123 579 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.51■□□□□ 0.07
FAM228BP0C875 AC007389.4-201ENST00000454674 793 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 RN7SL752P-201ENST00000463779 287 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 FTH1P14-201ENST00000482930 551 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.51■□□□□ 0.07
FAM228BP0C875 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AC078819.1-201ENST00000547454 765 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AC012085.1-201ENST00000548270 765 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.51■□□□□ 0.07
FAM228BP0C875 RN7SL713P-201ENST00000582127 302 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.51■□□□□ 0.07
FAM228BP0C875 BAP1-211ENST00000615113 489 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AL354718.3-201ENST00000616414 581 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 CR382287.1-201ENST00000623954 586 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.51■□□□□ 0.07
FAM228BP0C875 AC006453.4-201ENST00000636949 1252 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 AC099521.3-201ENST00000624251 2938 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
FAM228BP0C875 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FAM228BP0C875 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FAM228BP0C875 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
FAM228BP0C875 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FAM228BP0C875 AC020658.7-201ENST00000624274 2442 ntBASIC15.51■□□□□ 0.07
FAM228BP0C875 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FAM228BP0C875 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.5■□□□□ 0.07
FAM228BP0C875 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.5■□□□□ 0.07
FAM228BP0C875 AL035414.1-201ENST00000451327 857 ntBASIC15.5■□□□□ 0.07
FAM228BP0C875 COX5BP1-201ENST00000507622 393 ntBASIC15.5■□□□□ 0.07
FAM228BP0C875 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.5■□□□□ 0.07
FAM228BP0C875 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
FAM228BP0C875 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.5■□□□□ 0.07
FAM228BP0C875 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 AC008825.2-201ENST00000603374 718 ntBASIC15.5■□□□□ 0.07
FAM228BP0C875 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.5■□□□□ 0.07
FAM228BP0C875 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
FAM228BP0C875 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM228BP0C875 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM228BP0C875 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM228BP0C875 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.49■□□□□ 0.07
FAM228BP0C875 NCLP1-201ENST00000445357 1963 ntBASIC15.49■□□□□ 0.07
FAM228BP0C875 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM228BP0C875 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FAM228BP0C875 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FAM228BP0C875 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms