Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.61□□□□□ -0.23
HMGN2P05204 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.61□□□□□ -0.23
HMGN2P05204 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 AL512343.1-201ENST00000605837 169 ntBASIC13.61□□□□□ -0.23
HMGN2P05204 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.61□□□□□ -0.23
HMGN2P05204 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
HMGN2P05204 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGN2P05204 TUBB8P4-201ENST00000511806 1324 ntBASIC13.61□□□□□ -0.23
HMGN2P05204 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HMGN2P05204 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HMGN2P05204 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HMGN2P05204 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGN2P05204 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGN2P05204 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGN2P05204 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGN2P05204 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 E2F3P2-201ENST00000447755 1422 ntBASIC13.6□□□□□ -0.23
HMGN2P05204 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.6□□□□□ -0.23
HMGN2P05204 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 RAB43P1-201ENST00000561790 589 ntBASIC13.6□□□□□ -0.23
HMGN2P05204 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.6□□□□□ -0.23
HMGN2P05204 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGN2P05204 AC104506.1-201ENST00000609247 429 ntBASIC13.6□□□□□ -0.23
HMGN2P05204 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 AC008687.7-202ENST00000637404 953 ntBASIC13.6□□□□□ -0.23
HMGN2P05204 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HMGN2P05204 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGN2P05204 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HMGN2P05204 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms