Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRT6AP02538 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
KRT6AP02538 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 AL356585.2-201ENST00000625078 2396 ntBASIC14.17□□□□□ -0.14
KRT6AP02538 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
KRT6AP02538 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.17□□□□□ -0.14
KRT6AP02538 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 ARSEP1-201ENST00000420443 635 ntBASIC14.17□□□□□ -0.14
KRT6AP02538 FAM8A4P-201ENST00000435433 1213 ntBASIC14.17□□□□□ -0.14
KRT6AP02538 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 GNRHR2-203ENST00000581100 1187 ntBASIC14.17□□□□□ -0.14
KRT6AP02538 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.17□□□□□ -0.14
KRT6AP02538 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.17□□□□□ -0.14
KRT6AP02538 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 AC009093.2-202ENST00000620513 2079 ntBASIC14.17□□□□□ -0.14
KRT6AP02538 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.17□□□□□ -0.14
KRT6AP02538 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KRT6AP02538 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
KRT6AP02538 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KRT6AP02538 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
KRT6AP02538 AC004945.1-201ENST00000416738 983 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.16□□□□□ -0.14
KRT6AP02538 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.16□□□□□ -0.14
KRT6AP02538 RN7SL837P-201ENST00000463010 287 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 SLC25A47P1-201ENST00000531577 414 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 AC027237.1-201ENST00000560942 655 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
KRT6AP02538 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.16□□□□□ -0.14
KRT6AP02538 OR10B1P-201ENST00000601666 907 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 AL022328.1-201ENST00000610050 478 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 AC002472.3-201ENST00000640124 621 ntBASIC14.16□□□□□ -0.14
KRT6AP02538 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KRT6AP02538 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRT6AP02538 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.16□□□□□ -0.14
KRT6AP02538 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms