Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
HLA-DQB1P01920 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DQB1P01920 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.58□□□□□ -0.39
HLA-DQB1P01920 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.58□□□□□ -0.39
HLA-DQB1P01920 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DQB1P01920 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC004623.1-201ENST00000624592 2127 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AK2P2-201ENST00000439142 405 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC026410.3-201ENST00000514280 936 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC103988.2-201ENST00000561804 725 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC138761.1-201ENST00000584393 385 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC107373.2-201ENST00000607735 490 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AL158212.4-201ENST00000624062 1286 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AL928654.5-201ENST00000624831 2501 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.58□□□□□ -0.4
HLA-DQB1P01920 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DQB1P01920 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 PCDHA6-201ENST00000378126 3267 ntBASIC12.57□□□□□ -0.4
HLA-DQB1P01920 AC018445.4-201ENST00000624066 2291 ntBASIC12.57□□□□□ -0.4
HLA-DQB1P01920 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 AL139094.1-201ENST00000405549 1188 ntBASIC12.57□□□□□ -0.4
HLA-DQB1P01920 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DQB1P01920 CNN2P11-201ENST00000429351 262 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms