Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 AC015909.5-201ENST00000624336 2266 ntBASIC21.15■□□□□ 0.98
RAPGEF3O95398 AC090340.1-201ENST00000620778 4980 ntBASIC21.15■□□□□ 0.98
RAPGEF3O95398 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 FTH1P18-201ENST00000412071 549 ntBASIC21.15■□□□□ 0.98
RAPGEF3O95398 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 EEF1DP2-201ENST00000433698 843 ntBASIC21.15■□□□□ 0.98
RAPGEF3O95398 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 GULOP-201ENST00000454030 748 ntBASIC21.15■□□□□ 0.98
RAPGEF3O95398 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 HCG18-241ENST00000602290 821 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAPGEF3O95398 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC21.15■□□□□ 0.98
RAPGEF3O95398 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF3O95398 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF3O95398 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF3O95398 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAPGEF3O95398 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 U3.5-201ENST00000363448 216 ntBASIC21.14■□□□□ 0.97
RAPGEF3O95398 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 RN7SKP212-201ENST00000410851 328 ntBASIC21.14■□□□□ 0.97
RAPGEF3O95398 PGK1P2-201ENST00000431702 1214 ntBASIC21.14■□□□□ 0.97
RAPGEF3O95398 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAPGEF3O95398 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC21.14■□□□□ 0.97
RAPGEF3O95398 AL121753.2-201ENST00000624581 1461 ntBASIC21.13■□□□□ 0.97
RAPGEF3O95398 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 AL954722.1-201ENST00000431238 259 ntBASIC21.13■□□□□ 0.97
RAPGEF3O95398 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 AC022447.5-201ENST00000504817 392 ntBASIC21.13■□□□□ 0.97
RAPGEF3O95398 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 ABCC6P1-203ENST00000565566 1170 ntBASIC21.13■□□□□ 0.97
RAPGEF3O95398 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 AC215219.1-201ENST00000400706 1817 ntBASIC21.13■□□□□ 0.97
RAPGEF3O95398 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAPGEF3O95398 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAPGEF3O95398 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAPGEF3O95398 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAPGEF3O95398 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAPGEF3O95398 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC21.12■□□□□ 0.97
RAPGEF3O95398 AC064801.2-201ENST00000625052 1303 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms