Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 CYP4F23P-201ENST00000593402 1579 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AGAP10P-201ENST00000454844 2418 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH4O75427 AC089987.1-201ENST00000551654 2209 ntBASIC15.11■□□□□ 0.01
LRCH4O75427 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRCH4O75427 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 AC144522.1-201ENST00000625111 1658 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 MBLAC2-202ENST00000514906 1936 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH4O75427 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 USP17L6P-201ENST00000382470 1197 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 MIR658-201ENST00000385210 100 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.1■□□□□ 0.01
LRCH4O75427 AC012441.2-201ENST00000444843 739 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 HSPB1P2-201ENST00000448722 546 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 AL160314.3-201ENST00000556041 767 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.1■□□□□ 0.01
LRCH4O75427 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 AC009884.2-201ENST00000603110 324 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH4O75427 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 AC111170.3-201ENST00000624282 2464 ntBASIC15.1■□□□□ 0.01
LRCH4O75427 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRCH4O75427 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH4O75427 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH4O75427 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
LRCH4O75427 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH4O75427 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH4O75427 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRCH4O75427 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 LAP3P2-201ENST00000454686 1454 ntBASIC15.09■□□□□ 0.01
LRCH4O75427 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH4O75427 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH4O75427 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH4O75427 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH4O75427 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH4O75427 AC006122.1-201ENST00000493323 440 ntBASIC15.09■□□□□ 0.01
LRCH4O75427 RPSAP36-202ENST00000494591 1261 ntBASIC15.09■□□□□ 0.01
LRCH4O75427 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH4O75427 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.09■□□□□ 0.01
LRCH4O75427 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH4O75427 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 AC010328.2-201ENST00000597698 1111 ntBASIC15.09■□□□□ 0.01
LRCH4O75427 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.09■□□□□ 0.01
LRCH4O75427 MIR6805-201ENST00000615055 62 ntBASIC15.09■□□□□ 0.01
LRCH4O75427 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
LRCH4O75427 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH4O75427 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms