Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC005252.3-201ENST00000623855 2258 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AL022313.4-201ENST00000562756 2046 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC130686.1-201ENST00000622936 2466 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AL161932.2-201ENST00000435436 679 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 CHMP1AP1-201ENST00000445563 662 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 C2orf69P2-201ENST00000562032 1123 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AC064801.2-201ENST00000625052 1303 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.74□□□□□ -0.53
SRRM4A7MD48 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SRRM4A7MD48 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms