Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRRM3A6NNA2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.17■□□□□ 0.02
SRRM3A6NNA2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SRRM3A6NNA2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC090643.2-201ENST00000623442 2029 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC016694.1-201ENST00000434179 700 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC114501.1-201ENST00000445949 172 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC026979.3-201ENST00000607315 403 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 AC008687.7-202ENST00000637404 953 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 ST20-AS1-201ENST00000560255 4223 ntBASIC15.16■□□□□ 0.02
SRRM3A6NNA2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SRRM3A6NNA2 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 BX284668.4-201ENST00000453917 508 ntBASIC15.15■□□□□ 0.02
SRRM3A6NNA2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 CHMP4BP1-201ENST00000556017 588 ntBASIC15.15■□□□□ 0.02
SRRM3A6NNA2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 AC020914.3-201ENST00000594712 304 ntBASIC15.15■□□□□ 0.02
SRRM3A6NNA2 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms