Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 RPSAP15-201ENST00000448168 861 ntBASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 MIR3147-201ENST00000577811 66 ntBASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 MIR3677-201ENST00000578964 60 ntBASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 TNRC18P2-201ENST00000417666 2714 ntBASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AP000356.3-201ENST00000382243 753 ntBASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AL591471.1-201ENST00000621855 229 ntBASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TBC1D3FA6NER0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.46□□□□□ -0.1
TBC1D3FA6NER0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms