Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRIT2A6NDA9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AL928921.2-201ENST00000641325 2442 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AL022313.4-201ENST00000562756 2046 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 SCARNA21-201ENST00000517026 139 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AC003686.1-201ENST00000550956 1034 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AC124068.2-201ENST00000569473 1109 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 AC008805.1-201ENST00000590892 364 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 FAM90A7P-201ENST00000382628 1395 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 FAM90A23P-201ENST00000400136 1395 ntBASIC13.82□□□□□ -0.2
LRIT2A6NDA9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LRIT2A6NDA9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 HLA-J-204ENST00000495278 958 ntBASIC13.81□□□□□ -0.2
LRIT2A6NDA9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 RN7SL163P-201ENST00000583100 276 ntBASIC13.81□□□□□ -0.2
LRIT2A6NDA9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 AC004923.1-202ENST00000642106 209 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms