Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC084752.1-201ENST00000509766 622 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 MIR4472-1-201ENST00000584349 80 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 SIGLEC22P-201ENST00000599104 714 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC021016.3-201ENST00000608367 477 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AC138466.4-201ENST00000623965 852 ntBASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCDC187A0A096LP49 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 IL9RP3-201ENST00000442856 1674 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AC138035.3-201ENST00000622706 2791 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 MIR645-201ENST00000385283 94 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AC092580.1-201ENST00000433998 658 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 OR5BD1P-201ENST00000532527 817 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 C2orf69P1-201ENST00000563532 1093 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 MIR2392-201ENST00000584881 84 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 FO393412.1-201ENST00000619841 382 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 LINC00431-202ENST00000636375 159 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 AC015688.4-201ENST00000580780 1647 ntBASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.72□□□□□ -0.21
CCDC187A0A096LP49 CICP23-201ENST00000605013 2741 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AL357563.1-201ENST00000404728 395 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC141586.1-203ENST00000567242 366 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 MIR5196-201ENST00000578146 115 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 RN7SL665P-201ENST00000578793 300 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms