Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RIMBP3Q9UFD9 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC016304.1-201ENST00000476363 413 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 RPSAP5-201ENST00000485258 884 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 ALG1L14P-201ENST00000514230 434 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AL512631.1-201ENST00000604086 840 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 MIR4726-201ENST00000615971 58 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC138430.2-201ENST00000624068 504 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC080080.1-201ENST00000625121 2420 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 GGT8P-201ENST00000418938 532 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC096919.1-201ENST00000472730 652 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 RN7SL789P-201ENST00000478944 293 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 ALOX12P1-201ENST00000579299 1229 ntBASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC21.91■■□□□ 1.1
RIMBP3Q9UFD9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 CA6-205ENST00000480186 1493 ntTSL 2 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 AC103592.1-201ENST00000394513 664 ntBASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 uc_338.24-201ENST00000617802 182 ntBASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 TBC1D3P1-201ENST00000590047 1693 ntBASIC21.9■■□□□ 1.1
RIMBP3Q9UFD9 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 FAM90A22P-201ENST00000400142 1395 ntBASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RIMBP3Q9UFD9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 SNORA30.1-201ENST00000363193 129 ntBASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 OR7E122P-201ENST00000383606 1017 ntBASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 HNRNPA1P30-202ENST00000440699 997 ntBASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 AC131274.3-201ENST00000578745 1271 ntBASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 AC147067.2-201ENST00000608161 289 ntBASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RIMBP3Q9UFD9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms