Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 RN7SL720P-201ENST00000488178 304 ntBASIC13.72□□□□□ -0.21
CTSFQ9UBX1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 AC106872.11-201ENST00000605838 421 ntBASIC13.72□□□□□ -0.21
CTSFQ9UBX1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CTSFQ9UBX1 AC007686.3-201ENST00000619017 3487 ntBASIC13.72□□□□□ -0.21
CTSFQ9UBX1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 XBP1P1-201ENST00000436573 652 ntBASIC13.71□□□□□ -0.21
CTSFQ9UBX1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 OR2R1P-201ENST00000441404 914 ntBASIC13.71□□□□□ -0.21
CTSFQ9UBX1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 RNA5SP423-201ENST00000517127 109 ntBASIC13.71□□□□□ -0.21
CTSFQ9UBX1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AF254983.2-201ENST00000612331 135 ntBASIC13.71□□□□□ -0.21
CTSFQ9UBX1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 CICP24-201ENST00000605464 2705 ntBASIC13.71□□□□□ -0.21
CTSFQ9UBX1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSFQ9UBX1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CTSFQ9UBX1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 CICP20-201ENST00000443330 2801 ntBASIC13.7□□□□□ -0.22
CTSFQ9UBX1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSFQ9UBX1 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms