Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RNF7Q9UBF6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC007274.1-201ENST00000439805 662 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC106794.1-201ENST00000506935 792 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC126915.1-201ENST00000522847 1038 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 RN7SL163P-201ENST00000583100 276 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC008805.1-201ENST00000590892 364 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 BNIP3P13-201ENST00000599968 566 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AL118558.3-201ENST00000607414 1079 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AL022328.3-201ENST00000607943 679 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AL136295.7-201ENST00000619226 1200 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AL008638.5-201ENST00000623814 1298 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AL031595.1-201ENST00000623969 4709 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 AC144522.1-201ENST00000625111 1658 ntBASIC12.29□□□□□ -0.44
RNF7Q9UBF6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF7Q9UBF6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 DMBT1P1-203ENST00000636837 4628 ntBASIC12.28□□□□□ -0.44
RNF7Q9UBF6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.28□□□□□ -0.44
RNF7Q9UBF6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 FAM86MP-201ENST00000340703 885 ntBASIC12.28□□□□□ -0.44
RNF7Q9UBF6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF7Q9UBF6 RPL18P13-201ENST00000478088 569 ntBASIC12.28□□□□□ -0.44
RNF7Q9UBF6 SERPINA13P-202ENST00000478994 924 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms