Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AC092933.1-201ENST00000393644 945 ntBASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AP006294.1-201ENST00000415407 339 ntBASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 RN7SL713P-201ENST00000582127 302 ntBASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AL358472.3-201ENST00000608147 415 ntBASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM38AQ9H6F2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC010141.1-201ENST00000411585 623 ntBASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AL590640.2-201ENST00000457038 527 ntBASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 TERF1P3-201ENST00000505638 1227 ntBASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC073413.1-201ENST00000603927 732 ntBASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 AC006453.4-201ENST00000636949 1252 ntBASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM38AQ9H6F2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms