Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 MIR6069-201ENST00000620069 79 ntBASIC12.96□□□□□ -0.33
MMP28Q9H239 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.96□□□□□ -0.34
MMP28Q9H239 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
MMP28Q9H239 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.96□□□□□ -0.34
MMP28Q9H239 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
MMP28Q9H239 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MMP28Q9H239 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
MMP28Q9H239 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 LILRP1-201ENST00000444199 1370 ntBASIC12.95□□□□□ -0.34
MMP28Q9H239 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.95□□□□□ -0.34
MMP28Q9H239 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
MMP28Q9H239 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.95□□□□□ -0.34
MMP28Q9H239 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 AC022497.1-201ENST00000624916 3691 ntBASIC12.95□□□□□ -0.34
MMP28Q9H239 KHSRPP1-201ENST00000427983 1768 ntBASIC12.95□□□□□ -0.34
MMP28Q9H239 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TREML5P-201ENST00000421694 576 ntBASIC12.95□□□□□ -0.34
MMP28Q9H239 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.95□□□□□ -0.34
MMP28Q9H239 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.95□□□□□ -0.34
MMP28Q9H239 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.95□□□□□ -0.34
MMP28Q9H239 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MMP28Q9H239 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.95□□□□□ -0.34
MMP28Q9H239 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MMP28Q9H239 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MMP28Q9H239 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MMP28Q9H239 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.94□□□□□ -0.34
MMP28Q9H239 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
MMP28Q9H239 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MMP28Q9H239 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.94□□□□□ -0.34
MMP28Q9H239 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MMP28Q9H239 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.94□□□□□ -0.34
MMP28Q9H239 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MMP28Q9H239 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MMP28Q9H239 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MMP28Q9H239 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.94□□□□□ -0.34
MMP28Q9H239 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms