Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AL138725.1-201ENST00000407347 1314 ntBASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 ACTG1P19-201ENST00000418987 1116 ntBASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 MIR6746-201ENST00000620971 63 ntBASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 AL137783.1-201ENST00000623494 1896 ntBASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.01■□□□□ 0.15
UBE2OQ9C0C9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 PPT1-215ENST00000641471 2368 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 TMBIM7P-202ENST00000641474 1516 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 AC087481.3-201ENST00000602886 1894 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 ZBTB45P1-201ENST00000452761 1456 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 HLA-DPA2-205ENST00000433582 733 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 AL035414.1-201ENST00000451327 857 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 RN7SL357P-201ENST00000581065 298 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 AC023908.3-201ENST00000564211 3047 ntBASIC16■□□□□ 0.15
UBE2OQ9C0C9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16■□□□□ 0.15
UBE2OQ9C0C9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBE2OQ9C0C9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 AC013268.4-201ENST00000637413 2228 ntBASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBE2OQ9C0C9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms