Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.01□□□□□ -0.33
VRK1Q99986 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VRK1Q99986 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VRK1Q99986 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 TUBB1P2-201ENST00000422712 1306 ntBASIC13□□□□□ -0.33
VRK1Q99986 AHCYP2-201ENST00000430630 1300 ntBASIC13□□□□□ -0.33
VRK1Q99986 TUBB1P1-201ENST00000503144 1300 ntBASIC13□□□□□ -0.33
VRK1Q99986 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 PFN1P12-201ENST00000455938 534 ntBASIC13□□□□□ -0.33
VRK1Q99986 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13□□□□□ -0.33
VRK1Q99986 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13□□□□□ -0.33
VRK1Q99986 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 AC005562.1-201ENST00000583030 3219 ntBASIC13□□□□□ -0.33
VRK1Q99986 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VRK1Q99986 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
VRK1Q99986 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13□□□□□ -0.33
VRK1Q99986 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms