Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN18Q99952 AC117503.4-201ENST00000623229 1418 ntBASIC16.33■□□□□ 0.2
PTPN18Q99952 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN18Q99952 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN18Q99952 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTPN18Q99952 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN18Q99952 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN18Q99952 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN18Q99952 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN18Q99952 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN18Q99952 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN18Q99952 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTPN18Q99952 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTPN18Q99952 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN18Q99952 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AL157823.1-201ENST00000403727 628 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC073210.1-201ENST00000414799 232 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 NRADDP-201ENST00000437305 691 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN18Q99952 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN18Q99952 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 FBXO36P1-201ENST00000579006 471 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN18Q99952 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC104506.1-201ENST00000609247 429 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PTPN18Q99952 AC126755.5-201ENST00000622756 267 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 AC008536.3-201ENST00000623282 1599 ntBASIC16.32■□□□□ 0.2
PTPN18Q99952 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PTPN18Q99952 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN18Q99952 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 AC018442.1-201ENST00000421439 2061 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 AC022080.1-201ENST00000366255 781 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PTPN18Q99952 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN18Q99952 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
PTPN18Q99952 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 BAK1P2-201ENST00000532665 631 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPN18Q99952 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 AC233280.19-201ENST00000633223 136 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 AC091951.1-201ENST00000512854 2465 ntBASIC16.31■□□□□ 0.2
PTPN18Q99952 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
PTPN18Q99952 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms