Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ARID3AQ99856 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 AC084364.1-201ENST00000551967 1556 ntBASIC16.77■□□□□ 0.27
ARID3AQ99856 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ARID3AQ99856 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.76■□□□□ 0.27
ARID3AQ99856 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ARID3AQ99856 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ARID3AQ99856 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
ARID3AQ99856 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 SERBP1P5-201ENST00000510079 1181 ntBASIC16.76■□□□□ 0.27
ARID3AQ99856 MIR4745-201ENST00000577608 62 ntBASIC16.76■□□□□ 0.27
ARID3AQ99856 AC015910.1-201ENST00000579400 975 ntBASIC16.76■□□□□ 0.27
ARID3AQ99856 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 AL391069.4-201ENST00000609583 481 ntBASIC16.76■□□□□ 0.27
ARID3AQ99856 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
ARID3AQ99856 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ARID3AQ99856 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ARID3AQ99856 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ARID3AQ99856 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 AC126365.1-201ENST00000578585 1514 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 AC015909.5-201ENST00000624336 2266 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 AC004241.5-201ENST00000623870 2448 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 AC120057.1-201ENST00000483947 663 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 TIMM17BP1-201ENST00000545713 516 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 AC023310.3-201ENST00000557027 670 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 AC100756.1-201ENST00000562736 682 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 AC138749.3-201ENST00000567691 622 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 AC116165.1-201ENST00000611806 668 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.75■□□□□ 0.27
ARID3AQ99856 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ARID3AQ99856 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ARID3AQ99856 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.75■□□□□ 0.27
ARID3AQ99856 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
ARID3AQ99856 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 VENTXP1-201ENST00000569334 2716 ntBASIC16.75■□□□□ 0.27
ARID3AQ99856 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ARID3AQ99856 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARID3AQ99856 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARID3AQ99856 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ARID3AQ99856 CLK3P2-201ENST00000427566 1453 ntBASIC16.74■□□□□ 0.27
ARID3AQ99856 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.74■□□□□ 0.27
ARID3AQ99856 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.74■□□□□ 0.27
ARID3AQ99856 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARID3AQ99856 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARID3AQ99856 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms