Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDC6Q99741 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDC6Q99741 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDC6Q99741 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.02□□□□□ -0.17
CDC6Q99741 RN7SKP109-201ENST00000410592 316 ntBASIC14.02□□□□□ -0.17
CDC6Q99741 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.02□□□□□ -0.17
CDC6Q99741 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC6Q99741 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.02□□□□□ -0.17
CDC6Q99741 DNM1P51-201ENST00000558149 522 ntBASIC14.02□□□□□ -0.17
CDC6Q99741 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.02□□□□□ -0.17
CDC6Q99741 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.02□□□□□ -0.17
CDC6Q99741 AC007250.1-201ENST00000608934 338 ntBASIC14.02□□□□□ -0.17
CDC6Q99741 AC006158.1-201ENST00000610661 249 ntBASIC14.02□□□□□ -0.17
CDC6Q99741 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDC6Q99741 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CDC6Q99741 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC6Q99741 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CDC6Q99741 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDC6Q99741 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC6Q99741 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDC6Q99741 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC6Q99741 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC6Q99741 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.01□□□□□ -0.17
CDC6Q99741 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDC6Q99741 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CDC6Q99741 AC098934.1-203ENST00000442868 1262 ntBASIC14.01□□□□□ -0.17
CDC6Q99741 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.01□□□□□ -0.17
CDC6Q99741 SIGLEC22P-201ENST00000599104 714 ntBASIC14.01□□□□□ -0.17
CDC6Q99741 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.01□□□□□ -0.17
CDC6Q99741 AC005041.3-201ENST00000606287 649 ntBASIC14.01□□□□□ -0.17
CDC6Q99741 AC011471.3-201ENST00000623576 402 ntBASIC14.01□□□□□ -0.17
CDC6Q99741 REXO1L2P-201ENST00000425429 2069 ntBASIC14.01□□□□□ -0.17
CDC6Q99741 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC6Q99741 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDC6Q99741 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC6Q99741 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC6Q99741 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC6Q99741 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC6Q99741 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC6Q99741 AC013726.1-201ENST00000563747 2285 ntBASIC14.01□□□□□ -0.17
CDC6Q99741 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 AL590440.2-201ENST00000641973 1595 ntBASIC14□□□□□ -0.17
CDC6Q99741 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 GOLGA8DP-202ENST00000341390 2184 ntBASIC14□□□□□ -0.17
CDC6Q99741 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDC6Q99741 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDC6Q99741 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14□□□□□ -0.17
CDC6Q99741 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14□□□□□ -0.17
CDC6Q99741 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 AC092135.3-201ENST00000624151 1846 ntBASIC14□□□□□ -0.17
CDC6Q99741 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CDC6Q99741 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC6Q99741 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDC6Q99741 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms