Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.06■□□□□ 0.32
NUP88Q99567 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.06■□□□□ 0.32
NUP88Q99567 AC116345.2-201ENST00000512837 523 ntBASIC17.06■□□□□ 0.32
NUP88Q99567 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.06■□□□□ 0.32
NUP88Q99567 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 RBM8B-201ENST00000555532 525 ntBASIC17.06■□□□□ 0.32
NUP88Q99567 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.06■□□□□ 0.32
NUP88Q99567 MIR3907-201ENST00000579424 151 ntBASIC17.06■□□□□ 0.32
NUP88Q99567 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NUP88Q99567 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NUP88Q99567 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 AL590440.2-201ENST00000641973 1595 ntBASIC17.06■□□□□ 0.32
NUP88Q99567 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP88Q99567 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.06■□□□□ 0.32
NUP88Q99567 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP88Q99567 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NUP88Q99567 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP88Q99567 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NUP88Q99567 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP88Q99567 AC007274.2-201ENST00000421675 662 ntBASIC17.05■□□□□ 0.32
NUP88Q99567 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP88Q99567 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.05■□□□□ 0.32
NUP88Q99567 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
NUP88Q99567 AC092299.1-201ENST00000632679 757 ntBASIC17.05■□□□□ 0.32
NUP88Q99567 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NUP88Q99567 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP88Q99567 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 AC139749.1-202ENST00000617529 3139 ntBASIC17.05■□□□□ 0.32
NUP88Q99567 KRT8P21-201ENST00000430398 1491 ntBASIC17.05■□□□□ 0.32
NUP88Q99567 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
NUP88Q99567 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP88Q99567 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP88Q99567 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP88Q99567 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP88Q99567 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.04■□□□□ 0.32
NUP88Q99567 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 AC005912.2-201ENST00000619492 2400 ntBASIC17.04■□□□□ 0.32
NUP88Q99567 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP88Q99567 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP88Q99567 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP88Q99567 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NUP88Q99567 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.04■□□□□ 0.32
NUP88Q99567 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.04■□□□□ 0.32
NUP88Q99567 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.04■□□□□ 0.32
NUP88Q99567 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP88Q99567 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms